clarified directories;
authorwenzelm
Thu, 01 Jul 2021 14:06:20 +0200
changeset 73912 ac1639349ecf
parent 73911 a8c5ee444991
child 73913 631b61f06d0e
clarified directories;
Admin/lib/Tools/build_setup
src/Pure/Tools/scala_project.scala
src/Tools/Setup/isabelle/setup/Environment.java
src/Tools/Setup/isabelle/setup/Setup.java
src/Tools/Setup/src/META-INF/MANIFEST.MF
src/Tools/Setup/src/isabelle/setup/Environment.java
src/Tools/Setup/src/isabelle/setup/Setup.java
--- a/Admin/lib/Tools/build_setup	Thu Jul 01 13:46:42 2021 +0200
+++ b/Admin/lib/Tools/build_setup	Thu Jul 01 14:06:20 2021 +0200
@@ -53,7 +53,7 @@
 declare -a ARGS=("-Xlint:unchecked")
 for SRC in "${SOURCES[@]}"
 do
-  ARGS["${#ARGS[@]}"]="$(platform_path "$ISABELLE_HOME/src/Tools/Setup/src/isabelle/setup/$SRC")"
+  ARGS["${#ARGS[@]}"]="$(platform_path "$ISABELLE_HOME/src/Tools/Setup/isabelle/setup/$SRC")"
 done
 
 isabelle_jdk javac -d "$TARGET_DIR" "${ARGS[@]}" || \
--- a/src/Pure/Tools/scala_project.scala	Thu Jul 01 13:46:42 2021 +0200
+++ b/src/Pure/Tools/scala_project.scala	Thu Jul 01 14:06:20 2021 +0200
@@ -116,12 +116,9 @@
 
     Isabelle_System.copy_dir(Path.explode("~~/src/Tools/jEdit/dist/jEdit"), java_src_dir)
 
-    if (symlinks) {
-      Isabelle_System.symlink(Path.explode("~~/src/Tools/Setup/src/isabelle"), java_src_dir)
-    }
-    else {
-      Isabelle_System.copy_dir(Path.explode("~~/src/Tools/Setup/src"), java_src_dir)
-    }
+    val isabelle_setup_dir = Path.explode("~~/src/Tools/Setup/isabelle")
+    if (symlinks) Isabelle_System.symlink(isabelle_setup_dir, java_src_dir)
+    else Isabelle_System.copy_dir(isabelle_setup_dir, java_src_dir)
 
     val files = isabelle_files
     isabelle_scala_files
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/src/Tools/Setup/isabelle/setup/Environment.java	Thu Jul 01 14:06:20 2021 +0200
@@ -0,0 +1,376 @@
+/*  Title:      Pure/System/isabelle_env.scala
+    Author:     Makarius
+
+Fundamental Isabelle system environment: quasi-static module with
+optional init operation.
+*/
+
+package isabelle.setup;
+
+import java.io.File;
+import java.io.IOException;
+import java.nio.file.Files;
+import java.nio.file.Path;
+import java.util.HashMap;
+import java.util.LinkedList;
+import java.util.List;
+import java.util.Locale;
+import java.util.Map;
+import java.util.function.BiFunction;
+import java.util.regex.Matcher;
+import java.util.regex.Pattern;
+
+
+public class Environment
+{
+    /** Support for Cygwin as POSIX emulation on Windows **/
+
+    public static Boolean is_windows()
+    {
+        return System.getProperty("os.name", "").startsWith("Windows");
+    }
+
+    public static String quote(String s)
+    {
+        return "\"" + s + "\"";
+    }
+
+
+
+    /* system path representations */
+
+    private static String slashes(String s) { return s.replace('\\', '/'); }
+
+    public static String standard_path(String cygwin_root, String platform_path)
+    {
+        if (is_windows()) {
+            String backslashes = platform_path.replace('/', '\\');
+
+            Pattern root_pattern =
+                Pattern.compile("(?i)" + Pattern.quote(cygwin_root) + "(?:\\\\+|\\z)(.*)");
+            Matcher root_matcher = root_pattern.matcher(backslashes);
+
+            Pattern drive_pattern = Pattern.compile("([a-zA-Z]):\\\\*(.*)");
+            Matcher drive_matcher = drive_pattern.matcher(backslashes);
+
+            if (root_matcher.matches()) {
+                String rest = root_matcher.group(1);
+                return "/" + slashes(rest);
+            }
+            else if (drive_matcher.matches()) {
+                String letter = drive_matcher.group(1).toLowerCase(Locale.ROOT);
+                String rest = drive_matcher.group(2);
+                return "/cygdrive/" + letter + (rest.isEmpty() ? "" : "/" + slashes(rest));
+            }
+            else { return slashes(backslashes); }
+        }
+        else { return platform_path; }
+    }
+
+    public static String platform_path(String cygwin_root, String standard_path)
+    {
+        if (is_windows()) {
+            StringBuilder result_path = new StringBuilder();
+
+            Pattern cygdrive_pattern = Pattern.compile("/cygdrive/([a-zA-Z])($|/.*)");
+            Matcher cygdrive_matcher = cygdrive_pattern.matcher(standard_path);
+
+            Pattern named_root_pattern = Pattern.compile("//+([^/]*)(.*)");
+            Matcher named_root_matcher = named_root_pattern.matcher(standard_path);
+
+            String rest;
+            if (cygdrive_matcher.matches()) {
+                String drive = cygdrive_matcher.group(1).toUpperCase(Locale.ROOT);
+                rest = cygdrive_matcher.group(2);
+                result_path.append(drive);
+                result_path.append(':');
+                result_path.append(File.separatorChar);
+            }
+            else if (named_root_matcher.matches()) {
+                String root = named_root_matcher.group(1);
+                rest = named_root_matcher.group(2);
+                result_path.append(File.separatorChar);
+                result_path.append(File.separatorChar);
+                result_path.append(root);
+            }
+            else {
+                if (standard_path.startsWith("/")) { result_path.append(cygwin_root); }
+                rest = standard_path;
+            }
+
+            for (String p : rest.split("/", -1)) {
+                if (!p.isEmpty()) {
+                    int len = result_path.length();
+                    if (len > 0 && result_path.charAt(len - 1) != File.separatorChar) {
+                        result_path.append(File.separatorChar);
+                    }
+                    result_path.append(p);
+                }
+            }
+
+            return result_path.toString();
+        }
+        else { return standard_path; }
+    }
+
+
+    /* raw process */
+
+    public static ProcessBuilder process_builder(
+        List<String> cmd, File cwd, Map<String,String> env, boolean redirect)
+    {
+        ProcessBuilder builder = new ProcessBuilder();
+
+        // fragile on Windows:
+        // see https://docs.microsoft.com/en-us/cpp/cpp/main-function-command-line-args?view=msvc-160
+        builder.command(cmd);
+
+        if (cwd != null) builder.directory(cwd);
+        if (env != null) {
+            builder.environment().clear();
+            builder.environment().putAll(env);
+        }
+        builder.redirectErrorStream(redirect);
+
+        return builder;
+    }
+
+    public static class Exec_Result
+    {
+        private final int _rc;
+        private final String _out;
+        private final String _err;
+
+        Exec_Result(int rc, String out, String err)
+        {
+            _rc = rc;
+            _out = out;
+            _err = err;
+        }
+
+        public int rc() { return _rc; }
+        public boolean ok() { return _rc == 0; }
+        public String out() { return _out; }
+        public String err() { return _err; }
+    }
+
+    public static Exec_Result exec_process(
+        List<String> command_line,
+        File cwd,
+        Map<String,String> env,
+        boolean redirect) throws IOException, InterruptedException
+    {
+        Path out_file = Files.createTempFile(null, null);
+        Path err_file = Files.createTempFile(null, null);
+        Exec_Result res;
+        try {
+            ProcessBuilder builder = process_builder(command_line, cwd, env, redirect);
+            builder.redirectOutput(out_file.toFile());
+            builder.redirectError(err_file.toFile());
+
+            Process proc = builder.start();
+            proc.getOutputStream().close();
+            try { proc.waitFor(); }
+            finally {
+                proc.getInputStream().close();
+                proc.getErrorStream().close();
+                proc.destroy();
+                Thread.interrupted();
+            }
+
+            int rc = proc.exitValue();
+            String out = Files.readString(out_file);
+            String err = Files.readString(err_file);
+            res = new Exec_Result(rc, out, err);
+        }
+        finally {
+            Files.deleteIfExists(out_file);
+            Files.deleteIfExists(err_file);
+        }
+        return res;
+    }
+
+
+    /* init (e.g. after extraction via 7zip) */
+
+    private static String bootstrap_directory(
+        String preference, String variable, String property, String description)
+    {
+        String a = preference;  // explicit argument
+        String b = System.getenv(variable);  // e.g. inherited from running isabelle tool
+        String c = System.getProperty(property);  // e.g. via JVM application boot process
+        String dir;
+
+        if (a != null && !a.isEmpty()) { dir = a; }
+        else if (b != null && !b.isEmpty()) { dir = b; }
+        else if (c != null && !c.isEmpty()) { dir = c; }
+        else { throw new RuntimeException("Unknown " + description + " directory"); }
+
+        if ((new File(dir)).isDirectory()) { return dir; }
+        else { throw new RuntimeException("Bad " + description + " directory " + quote(dir)); }
+    }
+
+    private static void cygwin_exec(String isabelle_root, List<String> cmd)
+        throws IOException, InterruptedException
+    {
+        File cwd = new File(isabelle_root);
+        Map<String,String> env = new HashMap<String,String>(System.getenv());
+        env.put("CYGWIN", "nodosfilewarning");
+        Exec_Result res = exec_process(cmd, cwd, env, true);
+        if (!res.ok()) throw new RuntimeException(res.out());
+    }
+
+    public static void cygwin_link(String content, File target) throws IOException
+    {
+        Path target_path = target.toPath();
+        Files.writeString(target_path, "!<symlink>" + content + "\u0000");
+        Files.setAttribute(target_path, "dos:system", true);
+    }
+
+    public static void cygwin_init(String isabelle_root, String cygwin_root)
+        throws IOException, InterruptedException
+    {
+        if (is_windows()) {
+            File uninitialized_file = new File(cygwin_root, "isabelle\\uninitialized");
+            boolean uninitialized = uninitialized_file.isFile() && uninitialized_file.delete();
+
+            if (uninitialized) {
+                Path symlinks_path = (new File(cygwin_root + "\\isabelle\\symlinks")).toPath();
+                String[] symlinks = Files.readAllLines(symlinks_path).toArray(new String[0]);
+
+                // recover symlinks
+                int i = 0;
+                int m = symlinks.length;
+                int n = (m > 0 && symlinks[m - 1].isEmpty()) ? m - 1 : m;
+                while (i < n) {
+                    if (i + 1 < n) {
+                        String target = symlinks[i];
+                        String content = symlinks[i + 1];
+                        cygwin_link(content, new File(isabelle_root, target));
+                        i += 2;
+                    } else { throw new RuntimeException("Unbalanced symlinks list"); }
+                }
+
+                cygwin_exec(isabelle_root,
+                    List.of(cygwin_root + "\\bin\\dash.exe", "/isabelle/rebaseall"));
+                cygwin_exec(isabelle_root,
+                    List.of(cygwin_root + "\\bin\\bash.exe", "/isabelle/postinstall"));
+            }
+        }
+    }
+
+
+    /* implicit settings environment */
+
+    private static volatile Map<String,String> _settings = null;
+
+    public static Map<String,String> settings()
+        throws IOException, InterruptedException
+    {
+        if (_settings == null) { init("", ""); }  // unsynchronized check
+        return _settings;
+    }
+
+    public static synchronized void init(String _isabelle_root, String _cygwin_root)
+        throws IOException, InterruptedException
+    {
+        if (_settings == null) {
+            String isabelle_root =
+                bootstrap_directory(_isabelle_root, "ISABELLE_ROOT", "isabelle.root", "Isabelle root");
+
+            String cygwin_root = "";
+            if (is_windows()) {
+                cygwin_root = bootstrap_directory(_cygwin_root, "CYGWIN_ROOT", "cygwin.root", "Cygwin root");
+                cygwin_init(isabelle_root, cygwin_root);
+            }
+
+            Map<String,String> env = new HashMap<String,String>(System.getenv());
+
+            BiFunction<String,String,Void> env_default =
+                (String a, String b) -> { if (!b.isEmpty()) env.putIfAbsent(a, b); return null; };
+
+            String temp_windows = is_windows() ? System.getenv("TEMP") : null;
+
+            env_default.apply("CYGWIN_ROOT", cygwin_root);
+            env_default.apply("TEMP_WINDOWS",
+                (temp_windows != null && temp_windows.contains("\\")) ? temp_windows : "");
+            env_default.apply("ISABELLE_JDK_HOME",
+                standard_path(cygwin_root, System.getProperty("java.home", "")));
+            env_default.apply("HOME", System.getProperty("user.home", ""));
+            env_default.apply("ISABELLE_APP", System.getProperty("isabelle.app", ""));
+
+            Map<String,String> settings = new HashMap<String,String>();
+            Path settings_file = Files.createTempFile(null, null);
+            try {
+                List<String> cmd = new LinkedList<String>();
+                if (is_windows()) {
+                    cmd.add(cygwin_root + "\\bin\\bash");
+                    cmd.add("-l");
+                    cmd.add(standard_path(cygwin_root, isabelle_root + "\\bin\\isabelle"));
+                } else {
+                    cmd.add(isabelle_root + "/bin/isabelle");
+                }
+                cmd.add("getenv");
+                cmd.add("-d");
+                cmd.add(settings_file.toString());
+
+                Exec_Result res = exec_process(cmd, null, env, true);
+                if (!res.ok()) throw new RuntimeException(res.out());
+
+                for (String s : Files.readString(settings_file).split("\u0000", -1)) {
+                    int i = s.indexOf('=');
+                    if (i > 0) { settings.put(s.substring(0, i), s.substring(i + 1)); }
+                    else if (i < 0 && !s.isEmpty()) { settings.put(s, ""); }
+                }
+            }
+            finally { Files.delete(settings_file); }
+
+            if (is_windows()) { settings.put("CYGWIN_ROOT", cygwin_root); }
+
+            settings.put("PATH", settings.get("PATH_JVM"));
+            settings.remove("PATH_JVM");
+
+            _settings = Map.copyOf(settings);
+        }
+    }
+
+
+    /* Cygwin root (after init) */
+
+    public static String cygwin_root()
+        throws IOException, InterruptedException
+    {
+        return settings().getOrDefault("CYGWIN_ROOT", "");
+    }
+
+    public static String standard_path(String platform_path)
+        throws IOException, InterruptedException
+    {
+        return standard_path(cygwin_root(), platform_path);
+    }
+
+    public static String platform_path(String standard_path)
+        throws IOException, InterruptedException
+    {
+        return platform_path(cygwin_root(), standard_path);
+    }
+
+
+    /* kill process (via bash) */
+
+    static public boolean kill_process(String group_pid, String signal)
+        throws IOException, InterruptedException
+    {
+        List<String> cmd = new LinkedList<String>();
+        if (is_windows()) {
+            cmd.add(cygwin_root() + "\\bin\\bash.exe");
+        }
+        else {
+            cmd.add("/usr/bin/env");
+            cmd.add("bash");
+        }
+        cmd.add("-c");
+        cmd.add("kill -" + signal + " -" + group_pid);
+        return exec_process(cmd, null, null, false).ok();
+    }
+}
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/src/Tools/Setup/isabelle/setup/Setup.java	Thu Jul 01 14:06:20 2021 +0200
@@ -0,0 +1,15 @@
+/*  Title:      Tools/Setup/isabelle/setup/Setup.java
+    Author:     Makarius
+
+Isabelle setup tool: bootstrap from generic Java environment.
+*/
+
+package isabelle.setup;
+
+class Setup
+{
+    public static void main(String[] args)
+    {
+        System.out.println("Isabelle setup");
+    }
+}
--- a/src/Tools/Setup/src/META-INF/MANIFEST.MF	Thu Jul 01 13:46:42 2021 +0200
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,3 +0,0 @@
-Manifest-Version: 1.0
-Main-Class: isabelle.setup.Setup
-
--- a/src/Tools/Setup/src/isabelle/setup/Environment.java	Thu Jul 01 13:46:42 2021 +0200
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,376 +0,0 @@
-/*  Title:      Pure/System/isabelle_env.scala
-    Author:     Makarius
-
-Fundamental Isabelle system environment: quasi-static module with
-optional init operation.
-*/
-
-package isabelle.setup;
-
-import java.io.File;
-import java.io.IOException;
-import java.nio.file.Files;
-import java.nio.file.Path;
-import java.util.HashMap;
-import java.util.LinkedList;
-import java.util.List;
-import java.util.Locale;
-import java.util.Map;
-import java.util.function.BiFunction;
-import java.util.regex.Matcher;
-import java.util.regex.Pattern;
-
-
-public class Environment
-{
-    /** Support for Cygwin as POSIX emulation on Windows **/
-
-    public static Boolean is_windows()
-    {
-        return System.getProperty("os.name", "").startsWith("Windows");
-    }
-
-    public static String quote(String s)
-    {
-        return "\"" + s + "\"";
-    }
-
-
-
-    /* system path representations */
-
-    private static String slashes(String s) { return s.replace('\\', '/'); }
-
-    public static String standard_path(String cygwin_root, String platform_path)
-    {
-        if (is_windows()) {
-            String backslashes = platform_path.replace('/', '\\');
-
-            Pattern root_pattern =
-                Pattern.compile("(?i)" + Pattern.quote(cygwin_root) + "(?:\\\\+|\\z)(.*)");
-            Matcher root_matcher = root_pattern.matcher(backslashes);
-
-            Pattern drive_pattern = Pattern.compile("([a-zA-Z]):\\\\*(.*)");
-            Matcher drive_matcher = drive_pattern.matcher(backslashes);
-
-            if (root_matcher.matches()) {
-                String rest = root_matcher.group(1);
-                return "/" + slashes(rest);
-            }
-            else if (drive_matcher.matches()) {
-                String letter = drive_matcher.group(1).toLowerCase(Locale.ROOT);
-                String rest = drive_matcher.group(2);
-                return "/cygdrive/" + letter + (rest.isEmpty() ? "" : "/" + slashes(rest));
-            }
-            else { return slashes(backslashes); }
-        }
-        else { return platform_path; }
-    }
-
-    public static String platform_path(String cygwin_root, String standard_path)
-    {
-        if (is_windows()) {
-            StringBuilder result_path = new StringBuilder();
-
-            Pattern cygdrive_pattern = Pattern.compile("/cygdrive/([a-zA-Z])($|/.*)");
-            Matcher cygdrive_matcher = cygdrive_pattern.matcher(standard_path);
-
-            Pattern named_root_pattern = Pattern.compile("//+([^/]*)(.*)");
-            Matcher named_root_matcher = named_root_pattern.matcher(standard_path);
-
-            String rest;
-            if (cygdrive_matcher.matches()) {
-                String drive = cygdrive_matcher.group(1).toUpperCase(Locale.ROOT);
-                rest = cygdrive_matcher.group(2);
-                result_path.append(drive);
-                result_path.append(':');
-                result_path.append(File.separatorChar);
-            }
-            else if (named_root_matcher.matches()) {
-                String root = named_root_matcher.group(1);
-                rest = named_root_matcher.group(2);
-                result_path.append(File.separatorChar);
-                result_path.append(File.separatorChar);
-                result_path.append(root);
-            }
-            else {
-                if (standard_path.startsWith("/")) { result_path.append(cygwin_root); }
-                rest = standard_path;
-            }
-
-            for (String p : rest.split("/", -1)) {
-                if (!p.isEmpty()) {
-                    int len = result_path.length();
-                    if (len > 0 && result_path.charAt(len - 1) != File.separatorChar) {
-                        result_path.append(File.separatorChar);
-                    }
-                    result_path.append(p);
-                }
-            }
-
-            return result_path.toString();
-        }
-        else { return standard_path; }
-    }
-
-
-    /* raw process */
-
-    public static ProcessBuilder process_builder(
-        List<String> cmd, File cwd, Map<String,String> env, boolean redirect)
-    {
-        ProcessBuilder builder = new ProcessBuilder();
-
-        // fragile on Windows:
-        // see https://docs.microsoft.com/en-us/cpp/cpp/main-function-command-line-args?view=msvc-160
-        builder.command(cmd);
-
-        if (cwd != null) builder.directory(cwd);
-        if (env != null) {
-            builder.environment().clear();
-            builder.environment().putAll(env);
-        }
-        builder.redirectErrorStream(redirect);
-
-        return builder;
-    }
-
-    public static class Exec_Result
-    {
-        private final int _rc;
-        private final String _out;
-        private final String _err;
-
-        Exec_Result(int rc, String out, String err)
-        {
-            _rc = rc;
-            _out = out;
-            _err = err;
-        }
-
-        public int rc() { return _rc; }
-        public boolean ok() { return _rc == 0; }
-        public String out() { return _out; }
-        public String err() { return _err; }
-    }
-
-    public static Exec_Result exec_process(
-        List<String> command_line,
-        File cwd,
-        Map<String,String> env,
-        boolean redirect) throws IOException, InterruptedException
-    {
-        Path out_file = Files.createTempFile(null, null);
-        Path err_file = Files.createTempFile(null, null);
-        Exec_Result res;
-        try {
-            ProcessBuilder builder = process_builder(command_line, cwd, env, redirect);
-            builder.redirectOutput(out_file.toFile());
-            builder.redirectError(err_file.toFile());
-
-            Process proc = builder.start();
-            proc.getOutputStream().close();
-            try { proc.waitFor(); }
-            finally {
-                proc.getInputStream().close();
-                proc.getErrorStream().close();
-                proc.destroy();
-                Thread.interrupted();
-            }
-
-            int rc = proc.exitValue();
-            String out = Files.readString(out_file);
-            String err = Files.readString(err_file);
-            res = new Exec_Result(rc, out, err);
-        }
-        finally {
-            Files.deleteIfExists(out_file);
-            Files.deleteIfExists(err_file);
-        }
-        return res;
-    }
-
-
-    /* init (e.g. after extraction via 7zip) */
-
-    private static String bootstrap_directory(
-        String preference, String variable, String property, String description)
-    {
-        String a = preference;  // explicit argument
-        String b = System.getenv(variable);  // e.g. inherited from running isabelle tool
-        String c = System.getProperty(property);  // e.g. via JVM application boot process
-        String dir;
-
-        if (a != null && !a.isEmpty()) { dir = a; }
-        else if (b != null && !b.isEmpty()) { dir = b; }
-        else if (c != null && !c.isEmpty()) { dir = c; }
-        else { throw new RuntimeException("Unknown " + description + " directory"); }
-
-        if ((new File(dir)).isDirectory()) { return dir; }
-        else { throw new RuntimeException("Bad " + description + " directory " + quote(dir)); }
-    }
-
-    private static void cygwin_exec(String isabelle_root, List<String> cmd)
-        throws IOException, InterruptedException
-    {
-        File cwd = new File(isabelle_root);
-        Map<String,String> env = new HashMap<String,String>(System.getenv());
-        env.put("CYGWIN", "nodosfilewarning");
-        Exec_Result res = exec_process(cmd, cwd, env, true);
-        if (!res.ok()) throw new RuntimeException(res.out());
-    }
-
-    public static void cygwin_link(String content, File target) throws IOException
-    {
-        Path target_path = target.toPath();
-        Files.writeString(target_path, "!<symlink>" + content + "\u0000");
-        Files.setAttribute(target_path, "dos:system", true);
-    }
-
-    public static void cygwin_init(String isabelle_root, String cygwin_root)
-        throws IOException, InterruptedException
-    {
-        if (is_windows()) {
-            File uninitialized_file = new File(cygwin_root, "isabelle\\uninitialized");
-            boolean uninitialized = uninitialized_file.isFile() && uninitialized_file.delete();
-
-            if (uninitialized) {
-                Path symlinks_path = (new File(cygwin_root + "\\isabelle\\symlinks")).toPath();
-                String[] symlinks = Files.readAllLines(symlinks_path).toArray(new String[0]);
-
-                // recover symlinks
-                int i = 0;
-                int m = symlinks.length;
-                int n = (m > 0 && symlinks[m - 1].isEmpty()) ? m - 1 : m;
-                while (i < n) {
-                    if (i + 1 < n) {
-                        String target = symlinks[i];
-                        String content = symlinks[i + 1];
-                        cygwin_link(content, new File(isabelle_root, target));
-                        i += 2;
-                    } else { throw new RuntimeException("Unbalanced symlinks list"); }
-                }
-
-                cygwin_exec(isabelle_root,
-                    List.of(cygwin_root + "\\bin\\dash.exe", "/isabelle/rebaseall"));
-                cygwin_exec(isabelle_root,
-                    List.of(cygwin_root + "\\bin\\bash.exe", "/isabelle/postinstall"));
-            }
-        }
-    }
-
-
-    /* implicit settings environment */
-
-    private static volatile Map<String,String> _settings = null;
-
-    public static Map<String,String> settings()
-        throws IOException, InterruptedException
-    {
-        if (_settings == null) { init("", ""); }  // unsynchronized check
-        return _settings;
-    }
-
-    public static synchronized void init(String _isabelle_root, String _cygwin_root)
-        throws IOException, InterruptedException
-    {
-        if (_settings == null) {
-            String isabelle_root =
-                bootstrap_directory(_isabelle_root, "ISABELLE_ROOT", "isabelle.root", "Isabelle root");
-
-            String cygwin_root = "";
-            if (is_windows()) {
-                cygwin_root = bootstrap_directory(_cygwin_root, "CYGWIN_ROOT", "cygwin.root", "Cygwin root");
-                cygwin_init(isabelle_root, cygwin_root);
-            }
-
-            Map<String,String> env = new HashMap<String,String>(System.getenv());
-
-            BiFunction<String,String,Void> env_default =
-                (String a, String b) -> { if (!b.isEmpty()) env.putIfAbsent(a, b); return null; };
-
-            String temp_windows = is_windows() ? System.getenv("TEMP") : null;
-
-            env_default.apply("CYGWIN_ROOT", cygwin_root);
-            env_default.apply("TEMP_WINDOWS",
-                (temp_windows != null && temp_windows.contains("\\")) ? temp_windows : "");
-            env_default.apply("ISABELLE_JDK_HOME",
-                standard_path(cygwin_root, System.getProperty("java.home", "")));
-            env_default.apply("HOME", System.getProperty("user.home", ""));
-            env_default.apply("ISABELLE_APP", System.getProperty("isabelle.app", ""));
-
-            Map<String,String> settings = new HashMap<String,String>();
-            Path settings_file = Files.createTempFile(null, null);
-            try {
-                List<String> cmd = new LinkedList<String>();
-                if (is_windows()) {
-                    cmd.add(cygwin_root + "\\bin\\bash");
-                    cmd.add("-l");
-                    cmd.add(standard_path(cygwin_root, isabelle_root + "\\bin\\isabelle"));
-                } else {
-                    cmd.add(isabelle_root + "/bin/isabelle");
-                }
-                cmd.add("getenv");
-                cmd.add("-d");
-                cmd.add(settings_file.toString());
-
-                Exec_Result res = exec_process(cmd, null, env, true);
-                if (!res.ok()) throw new RuntimeException(res.out());
-
-                for (String s : Files.readString(settings_file).split("\u0000", -1)) {
-                    int i = s.indexOf('=');
-                    if (i > 0) { settings.put(s.substring(0, i), s.substring(i + 1)); }
-                    else if (i < 0 && !s.isEmpty()) { settings.put(s, ""); }
-                }
-            }
-            finally { Files.delete(settings_file); }
-
-            if (is_windows()) { settings.put("CYGWIN_ROOT", cygwin_root); }
-
-            settings.put("PATH", settings.get("PATH_JVM"));
-            settings.remove("PATH_JVM");
-
-            _settings = Map.copyOf(settings);
-        }
-    }
-
-
-    /* Cygwin root (after init) */
-
-    public static String cygwin_root()
-        throws IOException, InterruptedException
-    {
-        return settings().getOrDefault("CYGWIN_ROOT", "");
-    }
-
-    public static String standard_path(String platform_path)
-        throws IOException, InterruptedException
-    {
-        return standard_path(cygwin_root(), platform_path);
-    }
-
-    public static String platform_path(String standard_path)
-        throws IOException, InterruptedException
-    {
-        return platform_path(cygwin_root(), standard_path);
-    }
-
-
-    /* kill process (via bash) */
-
-    static public boolean kill_process(String group_pid, String signal)
-        throws IOException, InterruptedException
-    {
-        List<String> cmd = new LinkedList<String>();
-        if (is_windows()) {
-            cmd.add(cygwin_root() + "\\bin\\bash.exe");
-        }
-        else {
-            cmd.add("/usr/bin/env");
-            cmd.add("bash");
-        }
-        cmd.add("-c");
-        cmd.add("kill -" + signal + " -" + group_pid);
-        return exec_process(cmd, null, null, false).ok();
-    }
-}
--- a/src/Tools/Setup/src/isabelle/setup/Setup.java	Thu Jul 01 13:46:42 2021 +0200
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,15 +0,0 @@
-/*  Title:      Tools/Setup/isabelle/setup/Setup.java
-    Author:     Makarius
-
-Isabelle setup tool: bootstrap from generic Java environment.
-*/
-
-package isabelle.setup;
-
-class Setup
-{
-    public static void main(String[] args)
-    {
-        System.out.println("Isabelle setup");
-    }
-}